Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Shroom1Q5SX79 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.08■□□□□ 0
Shroom1Q5SX79 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.08■□□□□ 0
Shroom1Q5SX79 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Shroom1Q5SX79 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shroom1Q5SX79 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.08■□□□□ 0
Shroom1Q5SX79 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shroom1Q5SX79 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Shroom1Q5SX79 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shroom1Q5SX79 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Shroom1Q5SX79 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Gm14928-201ENSMUST00000120198 477 ntBASIC15.07■□□□□ 0
Shroom1Q5SX79 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.07■□□□□ 0
Shroom1Q5SX79 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.07■□□□□ 0
Shroom1Q5SX79 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Shroom1Q5SX79 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Shroom1Q5SX79 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shroom1Q5SX79 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.06■□□□□ 0
Shroom1Q5SX79 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Gm12585-201ENSMUST00000117307 290 ntBASIC15.06■□□□□ 0
Shroom1Q5SX79 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.06■□□□□ 0
Shroom1Q5SX79 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.06■□□□□ 0
Shroom1Q5SX79 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.06■□□□□ 0
Shroom1Q5SX79 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.06■□□□□ 0
Shroom1Q5SX79 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Shroom1Q5SX79 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.06■□□□□ 0
Shroom1Q5SX79 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.06■□□□□ 0
Shroom1Q5SX79 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shroom1Q5SX79 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shroom1Q5SX79 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shroom1Q5SX79 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Shroom1Q5SX79 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shroom1Q5SX79 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shroom1Q5SX79 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shroom1Q5SX79 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Shroom1Q5SX79 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shroom1Q5SX79 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.05■□□□□ -0
Shroom1Q5SX79 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Gm45668-201ENSMUST00000211271 493 ntBASIC15.05■□□□□ -0
Shroom1Q5SX79 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Gm15823-201ENSMUST00000064305 670 ntBASIC15.05■□□□□ -0
Shroom1Q5SX79 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms