Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gm7730-201ENSMUST00000212486 454 ntBASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gm18027-201ENSMUST00000218947 619 ntBASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Gm20445-201ENSMUST00000061905 565 ntBASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps54Q5SPW0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Gm12585-201ENSMUST00000117307 290 ntBASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps54Q5SPW0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps54Q5SPW0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps54Q5SPW0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps54Q5SPW0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Vps54Q5SPW0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.96■□□□□ 0.3
Vps54Q5SPW0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Gm8584-201ENSMUST00000171982 758 ntBASIC16.95■□□□□ 0.3
Vps54Q5SPW0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.95■□□□□ 0.3
Vps54Q5SPW0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Gm6218-201ENSMUST00000219812 628 ntBASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps54Q5SPW0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms