Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm13365-201ENSMUST00000121188 973 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Mir1895-201ENSMUST00000122615 79 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm18889-201ENSMUST00000174284 929 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav5d-4Q5R1F6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Trav5d-4Q5R1F6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms