Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm25925-201ENSMUST00000158314 306 ntBASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms