Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Celf4-206ENSMUST00000224553 1729 ntBASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-3Q5R1C3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-3Q5R1C3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms