Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Gm18624-201ENSMUST00000220966 658 ntBASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rc3h1Q4VGL6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rc3h1Q4VGL6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Gm4804-201ENSMUST00000182234 999 ntBASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Gm9908-201ENSMUST00000211534 448 ntBASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rc3h1Q4VGL6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Gm17795-201ENSMUST00000214505 757 ntBASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rc3h1Q4VGL6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Gm12091-201ENSMUST00000146791 830 ntBASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Gm18018-201ENSMUST00000198273 408 ntBASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms