Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Mir877-201ENSMUST00000104738 85 ntBASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Gm7809-201ENSMUST00000153199 742 ntBASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Gm8227-201ENSMUST00000223306 571 ntBASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank3Q4ACU6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank3Q4ACU6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Shank3Q4ACU6 Gm11591-201ENSMUST00000120063 702 ntBASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.21■□□□□ 0.35
Shank3Q4ACU6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms