Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp48Q3V0C5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp48Q3V0C5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp48Q3V0C5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.51■□□□□ 0.39
Usp48Q3V0C5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp48Q3V0C5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp48Q3V0C5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms