Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim80Q3V061 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim80Q3V061 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim80Q3V061 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.67□□□□□ -0.06
Trim80Q3V061 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.67□□□□□ -0.06
Trim80Q3V061 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Gm17271-201ENSMUST00000165535 355 ntBASIC14.67□□□□□ -0.06
Trim80Q3V061 Gm5682-201ENSMUST00000173402 505 ntBASIC14.67□□□□□ -0.06
Trim80Q3V061 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.67□□□□□ -0.06
Trim80Q3V061 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim80Q3V061 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim80Q3V061 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.66□□□□□ -0.06
Trim80Q3V061 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.66□□□□□ -0.06
Trim80Q3V061 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.66□□□□□ -0.06
Trim80Q3V061 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim80Q3V061 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim80Q3V061 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim80Q3V061 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.65□□□□□ -0.06
Trim80Q3V061 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim80Q3V061 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Gm44872-201ENSMUST00000207864 420 ntBASIC14.65□□□□□ -0.06
Trim80Q3V061 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim80Q3V061 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim80Q3V061 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim80Q3V061 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim80Q3V061 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim80Q3V061 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms