Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim40Q3UWA4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim40Q3UWA4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim40Q3UWA4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim40Q3UWA4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim40Q3UWA4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.29□□□□□ -0.28
Trim40Q3UWA4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Gm25990-201ENSMUST00000102440 86 ntBASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Gm7222-201ENSMUST00000117512 906 ntBASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim40Q3UWA4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44357-201ENSMUST00000195897 142 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm19658-201ENSMUST00000196231 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44367-201ENSMUST00000196836 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44350-201ENSMUST00000197197 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44390-201ENSMUST00000197533 144 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44313-201ENSMUST00000198018 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44486-201ENSMUST00000198508 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44314-201ENSMUST00000199263 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44394-201ENSMUST00000199558 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44484-201ENSMUST00000199873 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44466-201ENSMUST00000200264 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm44359-201ENSMUST00000200671 138 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim40Q3UWA4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms