Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm29269-201ENSMUST00000190087 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm21722-201ENSMUST00000190153 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm28423-201ENSMUST00000190701 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm21899-201ENSMUST00000190745 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm21910-201ENSMUST00000191163 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm21849-201ENSMUST00000191571 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm28678-201ENSMUST00000191593 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm20910-201ENSMUST00000193268 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm21871-201ENSMUST00000194621 696 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.36□□□□□ -0.27
Brf2Q3UAW9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm13365-201ENSMUST00000121188 973 ntBASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm2213-201ENSMUST00000197485 688 ntBASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brf2Q3UAW9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gm9824-201ENSMUST00000178707 561 ntBASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gm18049-201ENSMUST00000208909 581 ntBASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brf2Q3UAW9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Brf2Q3UAW9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Brf2Q3UAW9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms