Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Syt7-204ENSMUST00000223586 1344 ntBASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 BC001981-202ENSMUST00000191393 1545 ntBASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shcbp1lQ3TTP0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm23547-201ENSMUST00000158210 271 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm24694-201ENSMUST00000180054 110 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm27663-201ENSMUST00000184839 110 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm43703-201ENSMUST00000200523 763 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shcbp1lQ3TTP0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Gm4875-201ENSMUST00000118257 786 ntBASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Gm16215-201ENSMUST00000161990 637 ntBASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shcbp1lQ3TTP0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms