Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
Q3KNL4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Q3KNL4 Gm17968-201ENSMUST00000194902 784 ntBASIC13.93□□□□□ -0.18
Q3KNL4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Q3KNL4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3KNL4 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.93□□□□□ -0.18
Q3KNL4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Q3KNL4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Q3KNL4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Q3KNL4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Q3KNL4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Q3KNL4 Gm44492-201ENSMUST00000197012 141 ntBASIC13.92□□□□□ -0.18
Q3KNL4 Gm5364-201ENSMUST00000216789 889 ntBASIC13.92□□□□□ -0.18
Q3KNL4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.92□□□□□ -0.18
Q3KNL4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.92□□□□□ -0.18
Q3KNL4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Q3KNL4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3KNL4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.91□□□□□ -0.18
Q3KNL4 Gm1401-201ENSMUST00000122048 772 ntBASIC13.91□□□□□ -0.18
Q3KNL4 Gm12260-201ENSMUST00000122447 411 ntBASIC13.91□□□□□ -0.18
Q3KNL4 Gm9727-201ENSMUST00000161387 555 ntBASIC13.91□□□□□ -0.18
Q3KNL4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Q3KNL4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.91□□□□□ -0.18
Q3KNL4 Gm27920-201ENSMUST00000183953 96 ntBASIC13.91□□□□□ -0.18
Q3KNL4 Gm27741-201ENSMUST00000185060 237 ntBASIC13.91□□□□□ -0.18
Q3KNL4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.91□□□□□ -0.18
Q3KNL4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Q3KNL4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Q3KNL4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3KNL4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Q3KNL4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Q3KNL4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.9□□□□□ -0.18
Q3KNL4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Q3KNL4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Q3KNL4 Gm11543-201ENSMUST00000120758 370 ntBASIC13.9□□□□□ -0.18
Q3KNL4 Gm17271-201ENSMUST00000165535 355 ntBASIC13.9□□□□□ -0.18
Q3KNL4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.9□□□□□ -0.18
Q3KNL4 Gm8584-201ENSMUST00000171982 758 ntBASIC13.9□□□□□ -0.18
Q3KNL4 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.9□□□□□ -0.18
Q3KNL4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.9□□□□□ -0.18
Q3KNL4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.9□□□□□ -0.18
Q3KNL4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Q3KNL4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms