Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Gm5364-201ENSMUST00000216789 889 ntBASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Gm8749-201ENSMUST00000117737 331 ntBASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ptchd3Q0EEE2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ptchd3Q0EEE2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm13464-201ENSMUST00000119418 935 ntBASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms