Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.54□□□□□ -0.4
Chd8Q09XV5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Gm12485-201ENSMUST00000119641 291 ntBASIC12.54□□□□□ -0.4
Chd8Q09XV5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Gm37922-201ENSMUST00000195596 455 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Gm43752-201ENSMUST00000198475 697 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Gm17391-201ENSMUST00000171036 126 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Gm43610-201ENSMUST00000199117 365 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Gm17330-201ENSMUST00000221047 165 ntBASIC12.53□□□□□ -0.4
Chd8Q09XV5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Chd8Q09XV5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd8Q09XV5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd8Q09XV5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.52□□□□□ -0.4
Chd8Q09XV5 Gm11591-201ENSMUST00000120063 702 ntBASIC12.52□□□□□ -0.4
Chd8Q09XV5 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.52□□□□□ -0.4
Chd8Q09XV5 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.52□□□□□ -0.4
Chd8Q09XV5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chd8Q09XV5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.52□□□□□ -0.4
Chd8Q09XV5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd8Q09XV5 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.52□□□□□ -0.4
Chd8Q09XV5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.52□□□□□ -0.4
Chd8Q09XV5 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.52□□□□□ -0.4
Chd8Q09XV5 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.52□□□□□ -0.4
Chd8Q09XV5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd8Q09XV5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.52□□□□□ -0.41
Chd8Q09XV5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Gm30285-201ENSMUST00000214614 422 ntBASIC12.52□□□□□ -0.41
Chd8Q09XV5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.52□□□□□ -0.41
Chd8Q09XV5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd8Q09XV5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms