Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.85□□□□□ -0.19
Col9a1Q05722 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.85□□□□□ -0.19
Col9a1Q05722 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm9540-201ENSMUST00000188230 478 ntBASIC13.85□□□□□ -0.19
Col9a1Q05722 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Col9a1Q05722 AC162940.1-201ENSMUST00000224745 1167 ntBASIC13.85□□□□□ -0.19
Col9a1Q05722 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.85□□□□□ -0.19
Col9a1Q05722 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a1Q05722 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a1Q05722 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm42479-201ENSMUST00000198654 1356 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Mir686-201ENSMUST00000102174 109 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm13464-201ENSMUST00000119418 935 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm16479-201ENSMUST00000121706 932 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm9211-201ENSMUST00000182882 975 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm21470-201ENSMUST00000187680 696 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm8581-201ENSMUST00000188636 890 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm5708-201ENSMUST00000196289 886 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm40332-201ENSMUST00000199847 938 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm5425-201ENSMUST00000214125 459 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm8598-201ENSMUST00000221184 836 ntBASIC13.84□□□□□ -0.19
Col9a1Q05722 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col9a1Q05722 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col9a1Q05722 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.83□□□□□ -0.19
Col9a1Q05722 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col9a1Q05722 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Col9a1Q05722 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col9a1Q05722 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col9a1Q05722 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Col9a1Q05722 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm13255-201ENSMUST00000117255 547 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm6023-201ENSMUST00000118217 606 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms