Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox9Q04887 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Sox9Q04887 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox9Q04887 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Gm37008-201ENSMUST00000195712 319 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Gm42627-201ENSMUST00000197347 224 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Gm43118-201ENSMUST00000199149 775 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Sox9Q04887 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.56□□□□□ -0.08
Sox9Q04887 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox9Q04887 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.55□□□□□ -0.08
Sox9Q04887 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox9Q04887 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox9Q04887 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm11803-201ENSMUST00000119966 444 ntBASIC14.55□□□□□ -0.08
Sox9Q04887 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm26464-201ENSMUST00000157094 305 ntBASIC14.55□□□□□ -0.08
Sox9Q04887 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Gm38341-201ENSMUST00000195357 515 ntBASIC14.55□□□□□ -0.08
Sox9Q04887 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox9Q04887 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Sox9Q04887 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox9Q04887 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox9Q04887 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox9Q04887 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox9Q04887 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox9Q04887 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Gm22018-201ENSMUST00000104357 131 ntBASIC14.54□□□□□ -0.08
Sox9Q04887 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Gm15957-201ENSMUST00000118893 974 ntBASIC14.54□□□□□ -0.08
Sox9Q04887 Gm12176-201ENSMUST00000121420 875 ntBASIC14.54□□□□□ -0.08
Sox9Q04887 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox9Q04887 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox9Q04887 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.54□□□□□ -0.08
Sox9Q04887 Gm44397-201ENSMUST00000195950 113 ntBASIC14.54□□□□□ -0.08
Sox9Q04887 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox9Q04887 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox9Q04887 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox9Q04887 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Sox9Q04887 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms