Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.61■□□□□ 0.41
Col1a2Q01149 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.61■□□□□ 0.41
Col1a2Q01149 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a2Q01149 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a2Q01149 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a2Q01149 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Col1a2Q01149 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col1a2Q01149 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a2Q01149 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a2Q01149 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a2Q01149 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col1a2Q01149 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col1a2Q01149 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Col1a2Q01149 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Gm13829-201ENSMUST00000119600 138 ntBASIC17.6■□□□□ 0.41
Col1a2Q01149 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.6■□□□□ 0.41
Col1a2Q01149 Gm6244-201ENSMUST00000178732 841 ntBASIC17.6■□□□□ 0.41
Col1a2Q01149 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.6■□□□□ 0.41
Col1a2Q01149 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.6■□□□□ 0.41
Col1a2Q01149 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col1a2Q01149 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a2Q01149 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col1a2Q01149 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.59■□□□□ 0.41
Col1a2Q01149 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col1a2Q01149 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Col1a2Q01149 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col1a2Q01149 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col1a2Q01149 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Gm27892-201ENSMUST00000185017 106 ntBASIC17.59■□□□□ 0.41
Col1a2Q01149 Gm44719-201ENSMUST00000206404 149 ntBASIC17.59■□□□□ 0.41
Col1a2Q01149 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a2Q01149 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a2Q01149 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a2Q01149 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.58■□□□□ 0.41
Col1a2Q01149 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a2Q01149 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Col1a2Q01149 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Col1a2Q01149 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a2Q01149 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a2Q01149 Mir1894-201ENSMUST00000122802 81 ntBASIC17.58■□□□□ 0.4
Col1a2Q01149 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col1a2Q01149 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.58■□□□□ 0.4
Col1a2Q01149 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.58■□□□□ 0.4
Col1a2Q01149 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.58■□□□□ 0.4
Col1a2Q01149 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a2Q01149 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.58■□□□□ 0.4
Col1a2Q01149 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.57■□□□□ 0.4
Col1a2Q01149 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.57■□□□□ 0.4
Col1a2Q01149 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.57■□□□□ 0.4
Col1a2Q01149 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Gm6266-201ENSMUST00000203844 806 ntBASIC17.57■□□□□ 0.4
Col1a2Q01149 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms