Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm24659-201ENSMUST00000180212 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm24169-201ENSMUST00000180244 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm23689-201ENSMUST00000180354 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm27359-201ENSMUST00000184153 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm27785-201ENSMUST00000184268 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm27466-201ENSMUST00000184396 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm27703-201ENSMUST00000184836 110 ntBASIC14.4□□□□□ -0.1
Gabpb1Q00420 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.4□□□□□ -0.1
Gabpb1Q00420 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gabpb1Q00420 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabpb1Q00420 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Gm43474-201ENSMUST00000196415 774 ntBASIC14.39□□□□□ -0.11
Gabpb1Q00420 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.39□□□□□ -0.11
Gabpb1Q00420 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.39□□□□□ -0.11
Gabpb1Q00420 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Gm45453-201ENSMUST00000211758 853 ntBASIC14.39□□□□□ -0.11
Gabpb1Q00420 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.39□□□□□ -0.11
Gabpb1Q00420 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabpb1Q00420 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.38□□□□□ -0.11
Gabpb1Q00420 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm5566-201ENSMUST00000116118 459 ntBASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm27631-201ENSMUST00000184163 466 ntBASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabpb1Q00420 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms