Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Gm12742-201ENSMUST00000117326 410 ntBASIC17.67■□□□□ 0.42
Nkx2-3P97334 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Gm29741-201ENSMUST00000192667 421 ntBASIC17.67■□□□□ 0.42
Nkx2-3P97334 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.67■□□□□ 0.42
Nkx2-3P97334 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.67■□□□□ 0.42
Nkx2-3P97334 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-3P97334 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm16177-201ENSMUST00000120728 718 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Proscos-202ENSMUST00000178990 666 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm27772-201ENSMUST00000184900 187 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm42693-201ENSMUST00000196779 631 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.66■□□□□ 0.42
Nkx2-3P97334 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkx2-3P97334 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.65■□□□□ 0.42
Nkx2-3P97334 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Mir698-201ENSMUST00000102164 109 ntBASIC17.65■□□□□ 0.42
Nkx2-3P97334 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Gm44397-201ENSMUST00000195950 113 ntBASIC17.65■□□□□ 0.42
Nkx2-3P97334 Gm45331-201ENSMUST00000209868 554 ntBASIC17.65■□□□□ 0.42
Nkx2-3P97334 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Gm5161-201ENSMUST00000075243 853 ntBASIC17.65■□□□□ 0.42
Nkx2-3P97334 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Gm24447-201ENSMUST00000083977 338 ntBASIC17.65■□□□□ 0.42
Nkx2-3P97334 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-3P97334 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms