Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm7003-201ENSMUST00000195089 312 ntBASIC9.42□□□□□ -0.9
PrkdcP97313 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.42□□□□□ -0.9
PrkdcP97313 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.42□□□□□ -0.9
PrkdcP97313 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.42□□□□□ -0.9
PrkdcP97313 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PrkdcP97313 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PrkdcP97313 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm24749-201ENSMUST00000157838 343 ntBASIC9.42□□□□□ -0.9
PrkdcP97313 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.42□□□□□ -0.9
PrkdcP97313 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
PrkdcP97313 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PrkdcP97313 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.41□□□□□ -0.9
PrkdcP97313 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
PrkdcP97313 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC9.41□□□□□ -0.9
PrkdcP97313 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC9.41□□□□□ -0.9
PrkdcP97313 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm11675-201ENSMUST00000121873 832 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.41□□□□□ -0.9
PrkdcP97313 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.41□□□□□ -0.9
PrkdcP97313 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Efs-202ENSMUST00000227037 2540 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms