Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.41■□□□□ 0.06
Trim43cP86449 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trim43cP86449 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim43cP86449 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43cP86449 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim43cP86449 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trim43cP86449 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim43cP86449 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim43cP86449 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trim43cP86449 Gm22175-201ENSMUST00000175007 78 ntBASIC15.4■□□□□ 0.06
Trim43cP86449 Gm25144-201ENSMUST00000179561 110 ntBASIC15.4■□□□□ 0.06
Trim43cP86449 Gm25352-201ENSMUST00000179815 110 ntBASIC15.4■□□□□ 0.06
Trim43cP86449 Gm27321-201ENSMUST00000185021 205 ntBASIC15.4■□□□□ 0.06
Trim43cP86449 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim43cP86449 Gm6916-202ENSMUST00000205523 195 ntBASIC15.4■□□□□ 0.06
Trim43cP86449 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43cP86449 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43cP86449 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim43cP86449 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim43cP86449 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43cP86449 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim43cP86449 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43cP86449 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
Trim43cP86449 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.06
Trim43cP86449 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Trim43cP86449 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Trim43cP86449 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.39■□□□□ 0.05
Trim43cP86449 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim43cP86449 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim43cP86449 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.39■□□□□ 0.05
Trim43cP86449 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.39■□□□□ 0.05
Trim43cP86449 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.39■□□□□ 0.05
Trim43cP86449 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.39■□□□□ 0.05
Trim43cP86449 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim43cP86449 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43cP86449 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
Trim43cP86449 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Trim43cP86449 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim43cP86449 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Trim43cP86449 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim43cP86449 Gm43703-201ENSMUST00000200523 763 ntBASIC15.38■□□□□ 0.05
Trim43cP86449 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim43cP86449 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms