Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43bP86448 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43bP86448 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim43bP86448 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43bP86448 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim43bP86448 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.57□□□□□ -0.08
Trim43bP86448 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim43bP86448 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim43bP86448 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim43bP86448 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim43bP86448 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.57□□□□□ -0.08
Trim43bP86448 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43bP86448 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim43bP86448 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim43bP86448 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43bP86448 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.57□□□□□ -0.08
Trim43bP86448 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.57□□□□□ -0.08
Trim43bP86448 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trim43bP86448 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim43bP86448 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.57□□□□□ -0.08
Trim43bP86448 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim43bP86448 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43bP86448 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.56□□□□□ -0.08
Trim43bP86448 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.56□□□□□ -0.08
Trim43bP86448 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim43bP86448 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trim43bP86448 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim43bP86448 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Gm8749-201ENSMUST00000117737 331 ntBASIC14.56□□□□□ -0.08
Trim43bP86448 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim43bP86448 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Gm18737-201ENSMUST00000173594 937 ntBASIC14.56□□□□□ -0.08
Trim43bP86448 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Rpph1-201ENSMUST00000175096 319 ntBASIC14.56□□□□□ -0.08
Trim43bP86448 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trim43bP86448 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trim43bP86448 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Trim43bP86448 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43bP86448 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.55□□□□□ -0.08
Trim43bP86448 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim43bP86448 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms