Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Gm10275-201ENSMUST00000092620 635 ntBASIC14□□□□□ -0.17
Shox2P70390 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14□□□□□ -0.17
Shox2P70390 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Gm8096-201ENSMUST00000209921 1591 ntBASIC14□□□□□ -0.17
Shox2P70390 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Shox2P70390 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shox2P70390 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.99□□□□□ -0.17
Shox2P70390 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.99□□□□□ -0.17
Shox2P70390 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Gm6433-201ENSMUST00000118634 875 ntBASIC13.99□□□□□ -0.17
Shox2P70390 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.99□□□□□ -0.17
Shox2P70390 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Shox2P70390 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shox2P70390 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shox2P70390 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Shox2P70390 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.98□□□□□ -0.17
Shox2P70390 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.98□□□□□ -0.17
Shox2P70390 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.98□□□□□ -0.17
Shox2P70390 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Shox2P70390 Syt7-205ENSMUST00000224135 1557 ntBASIC13.98□□□□□ -0.17
Shox2P70390 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Shox2P70390 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Shox2P70390 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shox2P70390 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.98□□□□□ -0.17
Shox2P70390 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Shox2P70390 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.98□□□□□ -0.17
Shox2P70390 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.98□□□□□ -0.17
Shox2P70390 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.98□□□□□ -0.17
Shox2P70390 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.98□□□□□ -0.17
Shox2P70390 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Shox2P70390 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shox2P70390 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms