Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Hmgb1P63158 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.59■□□□□ 0.09
Hmgb1P63158 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.59■□□□□ 0.09
Hmgb1P63158 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm15467-201ENSMUST00000120582 445 ntBASIC15.59■□□□□ 0.09
Hmgb1P63158 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.59■□□□□ 0.09
Hmgb1P63158 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.59■□□□□ 0.09
Hmgb1P63158 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.59■□□□□ 0.09
Hmgb1P63158 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgb1P63158 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgb1P63158 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgb1P63158 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgb1P63158 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgb1P63158 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgb1P63158 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgb1P63158 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.58■□□□□ 0.08
Hmgb1P63158 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.58■□□□□ 0.08
Hmgb1P63158 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgb1P63158 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Hmgb1P63158 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.57■□□□□ 0.08
Hmgb1P63158 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Gm14494-201ENSMUST00000118786 435 ntBASIC15.57■□□□□ 0.08
Hmgb1P63158 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Gm38225-201ENSMUST00000194001 393 ntBASIC15.57■□□□□ 0.08
Hmgb1P63158 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.57■□□□□ 0.08
Hmgb1P63158 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.57■□□□□ 0.08
Hmgb1P63158 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.57■□□□□ 0.08
Hmgb1P63158 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Hmgb1P63158 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgb1P63158 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms