Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Gm18206-201ENSMUST00000207027 926 ntBASIC12.58□□□□□ -0.4
Sf3b6P59708 Gm45747-201ENSMUST00000212203 999 ntBASIC12.58□□□□□ -0.4
Sf3b6P59708 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sf3b6P59708 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm13036-201ENSMUST00000117799 748 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm1401-201ENSMUST00000122048 772 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm10275-202ENSMUST00000168697 495 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sf3b6P59708 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm10275-201ENSMUST00000092620 635 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.57□□□□□ -0.4
Sf3b6P59708 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.57□□□□□ -0.4
Sf3b6P59708 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sf3b6P59708 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sf3b6P59708 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3b6P59708 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.56□□□□□ -0.4
Sf3b6P59708 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.56□□□□□ -0.4
Sf3b6P59708 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sf3b6P59708 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Sf3b6P59708 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b6P59708 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms