Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.99■□□□□ 0.63
Nphp4P59240 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nphp4P59240 Gm5687-201ENSMUST00000118252 640 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm12403-201ENSMUST00000121384 959 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.99■□□□□ 0.63
Nphp4P59240 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Gm6152-201ENSMUST00000151704 340 ntBASIC18.98■□□□□ 0.63
Nphp4P59240 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.98■□□□□ 0.63
Nphp4P59240 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Nphp4P59240 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nphp4P59240 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nphp4P59240 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.97■□□□□ 0.63
Nphp4P59240 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.97■□□□□ 0.63
Nphp4P59240 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Nphp4P59240 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.97■□□□□ 0.63
Nphp4P59240 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.97■□□□□ 0.63
Nphp4P59240 Proscos-202ENSMUST00000178990 666 ntBASIC18.97■□□□□ 0.63
Nphp4P59240 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Gm6091-201ENSMUST00000098307 165 ntBASIC18.97■□□□□ 0.63
Nphp4P59240 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Nphp4P59240 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.97■□□□□ 0.63
Nphp4P59240 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.97■□□□□ 0.63
Nphp4P59240 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Nphp4P59240 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nphp4P59240 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.96■□□□□ 0.63
Nphp4P59240 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Nphp4P59240 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.96■□□□□ 0.63
Nphp4P59240 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.96■□□□□ 0.63
Nphp4P59240 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Nphp4P59240 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nphp4P59240 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.96■□□□□ 0.63
Nphp4P59240 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
Nphp4P59240 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms