Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.82■□□□□ 0.12
Tpm1P58771 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tpm1P58771 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.82■□□□□ 0.12
Tpm1P58771 Gm2451-201ENSMUST00000199447 999 ntBASIC15.82■□□□□ 0.12
Tpm1P58771 Gm10290-201ENSMUST00000200451 999 ntBASIC15.82■□□□□ 0.12
Tpm1P58771 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Rps4l-201ENSMUST00000071745 943 ntBASIC15.82■□□□□ 0.12
Tpm1P58771 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.82■□□□□ 0.12
Tpm1P58771 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tpm1P58771 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.82■□□□□ 0.12
Tpm1P58771 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tpm1P58771 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.81■□□□□ 0.12
Tpm1P58771 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tpm1P58771 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tpm1P58771 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Tpm1P58771 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Olfr286-202ENSMUST00000205305 969 ntBASIC15.81■□□□□ 0.12
Tpm1P58771 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Tpm1P58771 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm1P58771 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.8■□□□□ 0.12
Tpm1P58771 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm1P58771 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm1P58771 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Tpm1P58771 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.79■□□□□ 0.12
Tpm1P58771 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.79■□□□□ 0.12
Tpm1P58771 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.79■□□□□ 0.12
Tpm1P58771 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.79■□□□□ 0.12
Tpm1P58771 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.79■□□□□ 0.12
Tpm1P58771 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.79■□□□□ 0.12
Tpm1P58771 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Tpm1P58771 Gm4899-201ENSMUST00000178708 719 ntBASIC15.79■□□□□ 0.12
Tpm1P58771 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms