Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm11524-201ENSMUST00000119349 807 ntBASIC14.36□□□□□ -0.11
Ddx6P54823 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx6P54823 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.36□□□□□ -0.11
Ddx6P54823 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx6P54823 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Ddx6P54823 Gm19078-201ENSMUST00000206311 727 ntBASIC14.36□□□□□ -0.11
Ddx6P54823 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx6P54823 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.36□□□□□ -0.11
Ddx6P54823 Gm25857-201ENSMUST00000082788 129 ntBASIC14.36□□□□□ -0.11
Ddx6P54823 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx6P54823 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx6P54823 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ddx6P54823 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx6P54823 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx6P54823 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx6P54823 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx6P54823 Gm13829-201ENSMUST00000119600 138 ntBASIC14.35□□□□□ -0.11
Ddx6P54823 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx6P54823 Gm17150-201ENSMUST00000165577 381 ntBASIC14.35□□□□□ -0.11
Ddx6P54823 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx6P54823 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx6P54823 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx6P54823 Gm17794-201ENSMUST00000220252 955 ntBASIC14.35□□□□□ -0.11
Ddx6P54823 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.35□□□□□ -0.11
Ddx6P54823 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ddx6P54823 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx6P54823 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx6P54823 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx6P54823 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ddx6P54823 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.34□□□□□ -0.11
Ddx6P54823 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Gm18062-201ENSMUST00000208020 547 ntBASIC14.34□□□□□ -0.11
Ddx6P54823 Gm18055-201ENSMUST00000208254 547 ntBASIC14.34□□□□□ -0.11
Ddx6P54823 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Gm5356-201ENSMUST00000093326 615 ntBASIC14.34□□□□□ -0.11
Ddx6P54823 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx6P54823 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx6P54823 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx6P54823 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx6P54823 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ddx6P54823 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx6P54823 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.33□□□□□ -0.11
Ddx6P54823 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.33□□□□□ -0.12
Ddx6P54823 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx6P54823 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ddx6P54823 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms