Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nub1P54729 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.25■□□□□ 0.03
Nub1P54729 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nub1P54729 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.25■□□□□ 0.03
Nub1P54729 Gm12882-201ENSMUST00000121696 517 ntBASIC15.25■□□□□ 0.03
Nub1P54729 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nub1P54729 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.25■□□□□ 0.03
Nub1P54729 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.25■□□□□ 0.03
Nub1P54729 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.25■□□□□ 0.03
Nub1P54729 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nub1P54729 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.25■□□□□ 0.03
Nub1P54729 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nub1P54729 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.25■□□□□ 0.03
Nub1P54729 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.25■□□□□ 0.03
Nub1P54729 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Nub1P54729 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nub1P54729 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 BC001981-202ENSMUST00000191393 1545 ntBASIC15.24■□□□□ 0.03
Nub1P54729 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm8410-201ENSMUST00000117225 605 ntBASIC15.24■□□□□ 0.03
Nub1P54729 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.24■□□□□ 0.03
Nub1P54729 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm27618-201ENSMUST00000183671 60 ntBASIC15.24■□□□□ 0.03
Nub1P54729 Gm27430-201ENSMUST00000184585 107 ntBASIC15.24■□□□□ 0.03
Nub1P54729 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm44333-201ENSMUST00000197168 107 ntBASIC15.24■□□□□ 0.03
Nub1P54729 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.24■□□□□ 0.03
Nub1P54729 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.24■□□□□ 0.03
Nub1P54729 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nub1P54729 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nub1P54729 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.23■□□□□ 0.03
Nub1P54729 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nub1P54729 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Nub1P54729 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.23■□□□□ 0.03
Nub1P54729 Gm27622-201ENSMUST00000183779 60 ntBASIC15.23■□□□□ 0.03
Nub1P54729 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.23■□□□□ 0.03
Nub1P54729 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.23■□□□□ 0.03
Nub1P54729 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.23■□□□□ 0.03
Nub1P54729 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nub1P54729 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms