Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox3P53784 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox3P53784 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox3P53784 Gm14042-201ENSMUST00000120139 833 ntBASIC13.59□□□□□ -0.23
Sox3P53784 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sox3P53784 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.59□□□□□ -0.23
Sox3P53784 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Gm17150-201ENSMUST00000165577 381 ntBASIC13.59□□□□□ -0.23
Sox3P53784 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.59□□□□□ -0.23
Sox3P53784 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Sox3P53784 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.59□□□□□ -0.23
Sox3P53784 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Sox3P53784 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox3P53784 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox3P53784 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox3P53784 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox3P53784 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Sox3P53784 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.58□□□□□ -0.23
Sox3P53784 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox3P53784 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Sox3P53784 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Sox3P53784 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.58□□□□□ -0.24
Sox3P53784 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.58□□□□□ -0.24
Sox3P53784 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.58□□□□□ -0.24
Sox3P53784 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Sox3P53784 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Sox3P53784 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox3P53784 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox3P53784 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox3P53784 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Sox3P53784 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox3P53784 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms