Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Mir686-201ENSMUST00000102174 109 ntBASIC21.44■■□□□ 1.02
Cux1P53564 Gm10327-201ENSMUST00000105222 1002 ntBASIC21.44■■□□□ 1.02
Cux1P53564 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC21.44■■□□□ 1.02
Cux1P53564 Gm17823-201ENSMUST00000217830 1006 ntBASIC21.44■■□□□ 1.02
Cux1P53564 AC131997.1-201ENSMUST00000228611 1229 ntBASIC21.44■■□□□ 1.02
Cux1P53564 Itm2b-204ENSMUST00000228637 783 ntBASIC21.44■■□□□ 1.02
Cux1P53564 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cux1P53564 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cux1P53564 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC21.43■■□□□ 1.02
Cux1P53564 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cux1P53564 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cux1P53564 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Cux1P53564 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 AC133598.1-201ENSMUST00000224327 660 ntBASIC21.43■■□□□ 1.02
Cux1P53564 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cux1P53564 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Cux1P53564 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cux1P53564 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Gm12329-201ENSMUST00000120829 1007 ntBASIC21.42■■□□□ 1.02
Cux1P53564 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Cux1P53564 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cux1P53564 Gm11960-202ENSMUST00000181063 2858 ntBASIC21.42■■□□□ 1.02
Cux1P53564 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Cux1P53564 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cux1P53564 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Cux1P53564 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC21.41■■□□□ 1.02
Cux1P53564 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC21.41■■□□□ 1.02
Cux1P53564 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC21.41■■□□□ 1.02
Cux1P53564 Gm26927-201ENSMUST00000182385 965 ntBASIC21.41■■□□□ 1.02
Cux1P53564 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC21.41■■□□□ 1.02
Cux1P53564 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC21.41■■□□□ 1.02
Cux1P53564 AC154171.1-201ENSMUST00000224610 643 ntBASIC21.41■■□□□ 1.02
Cux1P53564 AC154276.1-201ENSMUST00000228874 1299 ntBASIC21.41■■□□□ 1.02
Cux1P53564 Rn7sk-201ENSMUST00000083103 331 ntBASIC21.41■■□□□ 1.02
Cux1P53564 Gm26315-201ENSMUST00000083890 321 ntBASIC21.41■■□□□ 1.02
Cux1P53564 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC21.41■■□□□ 1.02
Cux1P53564 Gm12020-201ENSMUST00000119030 2042 ntBASIC21.41■■□□□ 1.02
Cux1P53564 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cux1P53564 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cux1P53564 Gm9768-201ENSMUST00000206007 2861 ntBASIC21.41■■□□□ 1.02
Cux1P53564 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.4■■□□□ 1.02
Cux1P53564 Gm13123-201ENSMUST00000122173 492 ntBASIC21.4■■□□□ 1.02
Cux1P53564 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC21.4■■□□□ 1.02
Cux1P53564 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC21.4■■□□□ 1.02
Cux1P53564 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC21.4■■□□□ 1.02
Cux1P53564 CT009713.10-202ENSMUST00000225734 696 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms