Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.01□□□□□ -0.17
Pdx1P52946 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdx1P52946 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.01□□□□□ -0.17
Pdx1P52946 Gm25144-201ENSMUST00000179561 110 ntBASIC14.01□□□□□ -0.17
Pdx1P52946 Gm25352-201ENSMUST00000179815 110 ntBASIC14.01□□□□□ -0.17
Pdx1P52946 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.01□□□□□ -0.17
Pdx1P52946 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Gm6888-201ENSMUST00000221983 706 ntBASIC14.01□□□□□ -0.17
Pdx1P52946 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pdx1P52946 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.01□□□□□ -0.17
Pdx1P52946 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.01□□□□□ -0.17
Pdx1P52946 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdx1P52946 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pdx1P52946 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14□□□□□ -0.17
Pdx1P52946 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pdx1P52946 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Pdx1P52946 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14□□□□□ -0.17
Pdx1P52946 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14□□□□□ -0.17
Pdx1P52946 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14□□□□□ -0.17
Pdx1P52946 Gm17837-201ENSMUST00000186435 985 ntBASIC14□□□□□ -0.17
Pdx1P52946 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pdx1P52946 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdx1P52946 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdx1P52946 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pdx1P52946 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.99□□□□□ -0.17
Pdx1P52946 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.99□□□□□ -0.17
Pdx1P52946 Gm8584-201ENSMUST00000171982 758 ntBASIC13.99□□□□□ -0.17
Pdx1P52946 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.99□□□□□ -0.17
Pdx1P52946 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Pdx1P52946 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pdx1P52946 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdx1P52946 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms