Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Sox2P48432 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox2P48432 Gm7862-201ENSMUST00000121461 292 ntBASIC13.28□□□□□ -0.28
Sox2P48432 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Gm16026-204ENSMUST00000162652 683 ntBASIC13.28□□□□□ -0.28
Sox2P48432 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox2P48432 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.28□□□□□ -0.28
Sox2P48432 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox2P48432 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox2P48432 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Sox2P48432 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox2P48432 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sox2P48432 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox2P48432 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox2P48432 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox2P48432 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox2P48432 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Sox2P48432 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox2P48432 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.27□□□□□ -0.29
Sox2P48432 Gm13597-201ENSMUST00000121239 375 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.27□□□□□ -0.29
Sox2P48432 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Sox2P48432 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox2P48432 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Gm45098-201ENSMUST00000207179 657 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Gm10154-201ENSMUST00000084445 354 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Sox2P48432 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox2P48432 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox2P48432 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.27□□□□□ -0.29
Sox2P48432 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox2P48432 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.26□□□□□ -0.29
Sox2P48432 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Gm24589-201ENSMUST00000116692 94 ntBASIC13.26□□□□□ -0.29
Sox2P48432 Gm13036-201ENSMUST00000117799 748 ntBASIC13.26□□□□□ -0.29
Sox2P48432 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sox2P48432 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox2P48432 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms