Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Msh2P43247 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh2P43247 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Msh2P43247 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Gm14822-201ENSMUST00000122247 291 ntBASIC14.6□□□□□ -0.07
Msh2P43247 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Msh2P43247 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Msh2P43247 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Msh2P43247 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh2P43247 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Msh2P43247 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Msh2P43247 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Msh2P43247 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.59□□□□□ -0.07
Msh2P43247 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh2P43247 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.59□□□□□ -0.07
Msh2P43247 Gm11025-201ENSMUST00000140773 466 ntBASIC14.59□□□□□ -0.07
Msh2P43247 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.59□□□□□ -0.07
Msh2P43247 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Gm20553-201ENSMUST00000204205 844 ntBASIC14.59□□□□□ -0.07
Msh2P43247 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Msh2P43247 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.59□□□□□ -0.07
Msh2P43247 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh2P43247 Acot6-202ENSMUST00000222921 3622 ntBASIC14.59□□□□□ -0.07
Msh2P43247 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Msh2P43247 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Msh2P43247 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Msh2P43247 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Msh2P43247 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.58□□□□□ -0.07
Msh2P43247 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh2P43247 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.58□□□□□ -0.08
Msh2P43247 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Msh2P43247 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Gm2756-201ENSMUST00000195851 400 ntBASIC14.58□□□□□ -0.08
Msh2P43247 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.58□□□□□ -0.08
Msh2P43247 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Msh2P43247 Grk6-205ENSMUST00000224653 2976 ntBASIC14.58□□□□□ -0.08
Msh2P43247 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Msh2P43247 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Msh2P43247 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms