Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.33□□□□□ -0.28
Sox6P40645 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox6P40645 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Sox6P40645 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sox6P40645 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
Sox6P40645 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox6P40645 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox6P40645 Gm2213-201ENSMUST00000197485 688 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Gm45747-201ENSMUST00000212203 999 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.32□□□□□ -0.28
Sox6P40645 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.32□□□□□ -0.28
Sox6P40645 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox6P40645 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox6P40645 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox6P40645 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Sox6P40645 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.31□□□□□ -0.28
Sox6P40645 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Gm16198-201ENSMUST00000118766 670 ntBASIC13.31□□□□□ -0.28
Sox6P40645 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Gm17968-201ENSMUST00000194902 784 ntBASIC13.31□□□□□ -0.28
Sox6P40645 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox6P40645 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sox6P40645 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox6P40645 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox6P40645 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox6P40645 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox6P40645 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox6P40645 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox6P40645 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms