Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col18a1P39061 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col18a1P39061 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC18.38■□□□□ 0.53
Col18a1P39061 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col18a1P39061 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.38■□□□□ 0.53
Col18a1P39061 Gm31256-201ENSMUST00000194705 506 ntBASIC18.38■□□□□ 0.53
Col18a1P39061 Gm10109-202ENSMUST00000206890 1211 ntBASIC18.38■□□□□ 0.53
Col18a1P39061 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Gm32025-201ENSMUST00000217960 307 ntBASIC18.38■□□□□ 0.53
Col18a1P39061 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col18a1P39061 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col18a1P39061 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.38■□□□□ 0.53
Col18a1P39061 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Col18a1P39061 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Col18a1P39061 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.38■□□□□ 0.53
Col18a1P39061 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC18.38■□□□□ 0.53
Col18a1P39061 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col18a1P39061 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.37■□□□□ 0.53
Col18a1P39061 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.37■□□□□ 0.53
Col18a1P39061 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Col18a1P39061 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col18a1P39061 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Col18a1P39061 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col18a1P39061 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col18a1P39061 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18.37■□□□□ 0.53
Col18a1P39061 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC18.37■□□□□ 0.53
Col18a1P39061 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC18.37■□□□□ 0.53
Col18a1P39061 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col18a1P39061 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Gm38049-201ENSMUST00000195698 1372 ntBASIC18.36■□□□□ 0.53
Col18a1P39061 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col18a1P39061 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Snord83b-201ENSMUST00000104546 94 ntBASIC18.36■□□□□ 0.53
Col18a1P39061 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Col18a1P39061 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Mir1943-201ENSMUST00000158276 73 ntBASIC18.36■□□□□ 0.53
Col18a1P39061 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col18a1P39061 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col18a1P39061 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Col18a1P39061 Gm9678-201ENSMUST00000198979 1149 ntBASIC18.36■□□□□ 0.53
Col18a1P39061 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC18.36■□□□□ 0.53
Col18a1P39061 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC18.36■□□□□ 0.53
Col18a1P39061 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.36■□□□□ 0.53
Col18a1P39061 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col18a1P39061 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col18a1P39061 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.35■□□□□ 0.53
Col18a1P39061 Gm6447-201ENSMUST00000118905 835 ntBASIC18.35■□□□□ 0.53
Col18a1P39061 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC18.35■□□□□ 0.53
Col18a1P39061 Gm37835-201ENSMUST00000193305 361 ntBASIC18.35■□□□□ 0.53
Col18a1P39061 AC122305.4-201ENSMUST00000216159 1206 ntBASIC18.35■□□□□ 0.53
Col18a1P39061 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col18a1P39061 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col18a1P39061 Gm43378-201ENSMUST00000199336 582 ntBASIC18.35■□□□□ 0.53
Col18a1P39061 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC18.35■□□□□ 0.53
Col18a1P39061 Gm9004-201ENSMUST00000218739 1222 ntBASIC18.35■□□□□ 0.53
Col18a1P39061 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms