Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.04□□□□□ -0.32
Sftpa1P35242 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sftpa1P35242 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm23931-201ENSMUST00000103842 109 ntBASIC13.03□□□□□ -0.32
Sftpa1P35242 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.03□□□□□ -0.32
Sftpa1P35242 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.03□□□□□ -0.32
Sftpa1P35242 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm29649-201ENSMUST00000185649 419 ntBASIC13.03□□□□□ -0.32
Sftpa1P35242 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm5425-201ENSMUST00000214125 459 ntBASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.03□□□□□ -0.32
Sftpa1P35242 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sftpa1P35242 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sftpa1P35242 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.02□□□□□ -0.32
Sftpa1P35242 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.02□□□□□ -0.32
Sftpa1P35242 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Sftpa1P35242 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Sftpa1P35242 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sftpa1P35242 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sftpa1P35242 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm11524-201ENSMUST00000119349 807 ntBASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm37714-201ENSMUST00000194742 342 ntBASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.02□□□□□ -0.33
Sftpa1P35242 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.02□□□□□ -0.33
Sftpa1P35242 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sftpa1P35242 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sftpa1P35242 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms