Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nckap1P28660 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nckap1P28660 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nckap1P28660 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nckap1P28660 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.09□□□□□ -0.15
Nckap1P28660 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nckap1P28660 Mir6392-201ENSMUST00000184924 108 ntBASIC14.09□□□□□ -0.15
Nckap1P28660 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.09□□□□□ -0.15
Nckap1P28660 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Gm45668-201ENSMUST00000211271 493 ntBASIC14.09□□□□□ -0.15
Nckap1P28660 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.09□□□□□ -0.15
Nckap1P28660 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.09□□□□□ -0.15
Nckap1P28660 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.09□□□□□ -0.15
Nckap1P28660 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nckap1P28660 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.09□□□□□ -0.15
Nckap1P28660 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.08□□□□□ -0.15
Nckap1P28660 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nckap1P28660 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Nckap1P28660 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nckap1P28660 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nckap1P28660 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.08□□□□□ -0.16
Nckap1P28660 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.08□□□□□ -0.16
Nckap1P28660 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.08□□□□□ -0.16
Nckap1P28660 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.08□□□□□ -0.16
Nckap1P28660 Gm45384-201ENSMUST00000210451 277 ntBASIC14.08□□□□□ -0.16
Nckap1P28660 Gm5425-201ENSMUST00000214125 459 ntBASIC14.08□□□□□ -0.16
Nckap1P28660 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.08□□□□□ -0.16
Nckap1P28660 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nckap1P28660 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nckap1P28660 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nckap1P28660 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.07□□□□□ -0.16
Nckap1P28660 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.07□□□□□ -0.16
Nckap1P28660 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.07□□□□□ -0.16
Nckap1P28660 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.07□□□□□ -0.16
Nckap1P28660 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nckap1P28660 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nckap1P28660 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nckap1P28660 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.07□□□□□ -0.16
Nckap1P28660 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.07□□□□□ -0.16
Nckap1P28660 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.07□□□□□ -0.16
Nckap1P28660 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.07□□□□□ -0.16
Nckap1P28660 Gm18624-201ENSMUST00000220966 658 ntBASIC14.07□□□□□ -0.16
Nckap1P28660 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nckap1P28660 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nckap1P28660 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nckap1P28660 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms