Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.1□□□□□ -0.31
Cd40lgP27548 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Gm8749-201ENSMUST00000117737 331 ntBASIC13.09□□□□□ -0.31
Cd40lgP27548 Gm13616-201ENSMUST00000120600 222 ntBASIC13.09□□□□□ -0.31
Cd40lgP27548 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.09□□□□□ -0.31
Cd40lgP27548 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.09□□□□□ -0.31
Cd40lgP27548 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.09□□□□□ -0.31
Cd40lgP27548 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd40lgP27548 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd40lgP27548 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd40lgP27548 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd40lgP27548 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd40lgP27548 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.08□□□□□ -0.32
Cd40lgP27548 Gm12134-201ENSMUST00000122109 520 ntBASIC13.08□□□□□ -0.32
Cd40lgP27548 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Gm25948-201ENSMUST00000175334 112 ntBASIC13.08□□□□□ -0.32
Cd40lgP27548 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Mir6956-201ENSMUST00000183598 62 ntBASIC13.08□□□□□ -0.32
Cd40lgP27548 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.08□□□□□ -0.32
Cd40lgP27548 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.08□□□□□ -0.32
Cd40lgP27548 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.08□□□□□ -0.32
Cd40lgP27548 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd40lgP27548 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms