Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.47□□□□□ -0.25
Msx1P13297 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Msx1P13297 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.47□□□□□ -0.25
Msx1P13297 Gm9719-201ENSMUST00000162765 543 ntBASIC13.47□□□□□ -0.25
Msx1P13297 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC13.47□□□□□ -0.25
Msx1P13297 Gm45384-201ENSMUST00000210451 277 ntBASIC13.47□□□□□ -0.25
Msx1P13297 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.47□□□□□ -0.25
Msx1P13297 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Msx1P13297 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.47□□□□□ -0.25
Msx1P13297 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msx1P13297 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.47□□□□□ -0.25
Msx1P13297 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.47□□□□□ -0.25
Msx1P13297 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Msx1P13297 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.46□□□□□ -0.25
Msx1P13297 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.46□□□□□ -0.25
Msx1P13297 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.46□□□□□ -0.25
Msx1P13297 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.46□□□□□ -0.25
Msx1P13297 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.46□□□□□ -0.25
Msx1P13297 Gm29667-201ENSMUST00000190817 490 ntBASIC13.46□□□□□ -0.25
Msx1P13297 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Gm43037-201ENSMUST00000196808 250 ntBASIC13.46□□□□□ -0.25
Msx1P13297 Gm45098-201ENSMUST00000207179 657 ntBASIC13.46□□□□□ -0.25
Msx1P13297 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.46□□□□□ -0.25
Msx1P13297 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msx1P13297 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Msx1P13297 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msx1P13297 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msx1P13297 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Msx1P13297 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Msx1P13297 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Msx1P13297 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Msx1P13297 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msx1P13297 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Msx1P13297 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msx1P13297 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msx1P13297 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Msx1P13297 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Gm5479-201ENSMUST00000160578 435 ntBASIC13.45□□□□□ -0.26
Msx1P13297 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Msx1P13297 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.45□□□□□ -0.26
Msx1P13297 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.45□□□□□ -0.26
Msx1P13297 AC155266.1-201ENSMUST00000220762 904 ntBASIC13.45□□□□□ -0.26
Msx1P13297 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Msx1P13297 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Msx1P13297 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms