Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm6222-201ENSMUST00000120787 396 ntBASIC13.28□□□□□ -0.28
Nid1P10493 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.28□□□□□ -0.28
Nid1P10493 Gm18049-201ENSMUST00000208909 581 ntBASIC13.28□□□□□ -0.28
Nid1P10493 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.28□□□□□ -0.28
Nid1P10493 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nid1P10493 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.28□□□□□ -0.28
Nid1P10493 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Nid1P10493 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Nid1P10493 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nid1P10493 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.28□□□□□ -0.28
Nid1P10493 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nid1P10493 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nid1P10493 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nid1P10493 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.27□□□□□ -0.28
Nid1P10493 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.27□□□□□ -0.28
Nid1P10493 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nid1P10493 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nid1P10493 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nid1P10493 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nid1P10493 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nid1P10493 Gm13823-201ENSMUST00000119930 345 ntBASIC13.27□□□□□ -0.29
Nid1P10493 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.27□□□□□ -0.29
Nid1P10493 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.27□□□□□ -0.29
Nid1P10493 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nid1P10493 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.27□□□□□ -0.29
Nid1P10493 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.27□□□□□ -0.29
Nid1P10493 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.27□□□□□ -0.29
Nid1P10493 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nid1P10493 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nid1P10493 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Nid1P10493 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nid1P10493 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.27□□□□□ -0.29
Nid1P10493 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.26□□□□□ -0.29
Nid1P10493 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.26□□□□□ -0.29
Nid1P10493 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.26□□□□□ -0.29
Nid1P10493 Mir6990-201ENSMUST00000183724 91 ntBASIC13.26□□□□□ -0.29
Nid1P10493 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.26□□□□□ -0.29
Nid1P10493 Gm45453-201ENSMUST00000211758 853 ntBASIC13.26□□□□□ -0.29
Nid1P10493 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.26□□□□□ -0.29
Nid1P10493 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nid1P10493 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nid1P10493 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.26□□□□□ -0.29
Nid1P10493 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nid1P10493 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Nid1P10493 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nid1P10493 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms