Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Gm27430-201ENSMUST00000184585 107 ntBASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Gm44333-201ENSMUST00000197168 107 ntBASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp6P0C0A3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Gm22175-201ENSMUST00000175007 78 ntBASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.44■□□□□ 0.06
Chmp6P0C0A3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chmp6P0C0A3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms