Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h2P0C090 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h2P0C090 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h2P0C090 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.41□□□□□ -0.1
Rc3h2P0C090 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.41□□□□□ -0.1
Rc3h2P0C090 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h2P0C090 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h2P0C090 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.4□□□□□ -0.1
Rc3h2P0C090 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.4□□□□□ -0.1
Rc3h2P0C090 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Gm19220-201ENSMUST00000222682 803 ntBASIC14.4□□□□□ -0.1
Rc3h2P0C090 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.4□□□□□ -0.1
Rc3h2P0C090 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h2P0C090 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.4□□□□□ -0.1
Rc3h2P0C090 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h2P0C090 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.39□□□□□ -0.11
Rc3h2P0C090 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Gm6912-201ENSMUST00000117218 544 ntBASIC14.39□□□□□ -0.11
Rc3h2P0C090 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.39□□□□□ -0.11
Rc3h2P0C090 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Gm12138-201ENSMUST00000122180 951 ntBASIC14.39□□□□□ -0.11
Rc3h2P0C090 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.39□□□□□ -0.11
Rc3h2P0C090 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.39□□□□□ -0.11
Rc3h2P0C090 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.39□□□□□ -0.11
Rc3h2P0C090 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h2P0C090 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Gm5354-201ENSMUST00000182417 973 ntBASIC14.38□□□□□ -0.11
Rc3h2P0C090 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.38□□□□□ -0.11
Rc3h2P0C090 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h2P0C090 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms