Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.22■□□□□ 0.51
Hoxc9P09633 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.22■□□□□ 0.51
Hoxc9P09633 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.22■□□□□ 0.51
Hoxc9P09633 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.22■□□□□ 0.51
Hoxc9P09633 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc9P09633 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.21■□□□□ 0.51
Hoxc9P09633 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hoxc9P09633 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Hoxc9P09633 Gm42693-201ENSMUST00000196779 631 ntBASIC18.21■□□□□ 0.51
Hoxc9P09633 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxc9P09633 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxc9P09633 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hoxc9P09633 Gm5161-201ENSMUST00000075243 853 ntBASIC18.21■□□□□ 0.51
Hoxc9P09633 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.21■□□□□ 0.51
Hoxc9P09633 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.21■□□□□ 0.51
Hoxc9P09633 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc9P09633 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.21■□□□□ 0.51
Hoxc9P09633 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.2■□□□□ 0.5
Hoxc9P09633 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm11803-201ENSMUST00000119966 444 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Hoxc9P09633 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm18473-201ENSMUST00000220543 868 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm24447-201ENSMUST00000083977 338 ntBASIC18.2■□□□□ 0.5
Hoxc9P09633 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc9P09633 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Gm23931-201ENSMUST00000103842 109 ntBASIC18.19■□□□□ 0.5
Hoxc9P09633 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.19■□□□□ 0.5
Hoxc9P09633 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms