Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NclP09405 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC20.99■□□□□ 0.95
NclP09405 Gm23984-201ENSMUST00000157139 203 ntBASIC20.99■□□□□ 0.95
NclP09405 Gm6745-201ENSMUST00000199216 526 ntBASIC20.99■□□□□ 0.95
NclP09405 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC20.99■□□□□ 0.95
NclP09405 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC20.99■□□□□ 0.95
NclP09405 Gm6180-201ENSMUST00000065243 498 ntBASIC20.99■□□□□ 0.95
NclP09405 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NclP09405 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NclP09405 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.99■□□□□ 0.95
NclP09405 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NclP09405 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
NclP09405 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NclP09405 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC20.98■□□□□ 0.95
NclP09405 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NclP09405 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NclP09405 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC20.97■□□□□ 0.95
NclP09405 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC20.97■□□□□ 0.95
NclP09405 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC20.97■□□□□ 0.95
NclP09405 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.97■□□□□ 0.95
NclP09405 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NclP09405 Ighv5-13-201ENSMUST00000193550 290 ntBASIC20.97■□□□□ 0.95
NclP09405 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC20.97■□□□□ 0.95
NclP09405 AC154687.2-201ENSMUST00000223853 640 ntBASIC20.97■□□□□ 0.95
NclP09405 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NclP09405 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NclP09405 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Gm11960-202ENSMUST00000181063 2858 ntBASIC20.97■□□□□ 0.95
NclP09405 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NclP09405 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NclP09405 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NclP09405 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NclP09405 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NclP09405 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC20.96■□□□□ 0.95
NclP09405 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.96■□□□□ 0.95
NclP09405 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NclP09405 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC20.96■□□□□ 0.95
NclP09405 Gm19220-201ENSMUST00000222682 803 ntBASIC20.96■□□□□ 0.95
NclP09405 AC139580.1-202ENSMUST00000223574 928 ntBASIC20.96■□□□□ 0.95
NclP09405 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.96■□□□□ 0.95
NclP09405 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC20.96■□□□□ 0.95
NclP09405 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Gm45504-201ENSMUST00000211407 2107 ntBASIC20.96■□□□□ 0.95
NclP09405 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC20.96■□□□□ 0.95
NclP09405 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.96■□□□□ 0.95
NclP09405 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NclP09405 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC20.95■□□□□ 0.94
NclP09405 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC20.95■□□□□ 0.94
NclP09405 Gm12091-201ENSMUST00000146791 830 ntBASIC20.95■□□□□ 0.94
NclP09405 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC20.95■□□□□ 0.94
NclP09405 Gm5425-201ENSMUST00000214125 459 ntBASIC20.95■□□□□ 0.94
NclP09405 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC20.95■□□□□ 0.94
NclP09405 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
NclP09405 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NclP09405 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC20.94■□□□□ 0.94
NclP09405 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NclP09405 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms