Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a2P08122 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a2P08122 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Col4a2P08122 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col4a2P08122 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a2P08122 Gm16177-201ENSMUST00000120728 718 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Gm10156-201ENSMUST00000122364 462 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.93□□□□□ -0.34
Col4a2P08122 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a2P08122 Gm43133-201ENSMUST00000197472 463 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Gm38671-201ENSMUST00000200573 130 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col4a2P08122 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col4a2P08122 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Col4a2P08122 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col4a2P08122 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.93□□□□□ -0.34
Col4a2P08122 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col4a2P08122 Gm38002-201ENSMUST00000193255 180 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
Col4a2P08122 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a2P08122 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a2P08122 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Col4a2P08122 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col4a2P08122 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.92□□□□□ -0.34
Col4a2P08122 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Col4a2P08122 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.92□□□□□ -0.34
Col4a2P08122 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.92□□□□□ -0.34
Col4a2P08122 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.92□□□□□ -0.34
Col4a2P08122 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.92□□□□□ -0.34
Col4a2P08122 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.92□□□□□ -0.34
Col4a2P08122 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col4a2P08122 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.92□□□□□ -0.34
Col4a2P08122 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a2P08122 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col4a2P08122 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.91□□□□□ -0.34
Col4a2P08122 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.91□□□□□ -0.34
Col4a2P08122 Gm6013-201ENSMUST00000212264 699 ntBASIC12.91□□□□□ -0.34
Col4a2P08122 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col4a2P08122 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Col4a2P08122 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Col4a2P08122 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a2P08122 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
Col4a2P08122 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms