Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.92□□□□□ -0.18
Hoxa4P06798 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa4P06798 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa4P06798 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.91□□□□□ -0.18
Hoxa4P06798 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxa4P06798 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxa4P06798 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxa4P06798 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.91□□□□□ -0.18
Hoxa4P06798 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxa4P06798 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.91□□□□□ -0.18
Hoxa4P06798 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.91□□□□□ -0.18
Hoxa4P06798 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.91□□□□□ -0.18
Hoxa4P06798 Gm20445-201ENSMUST00000061905 565 ntBASIC13.91□□□□□ -0.18
Hoxa4P06798 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa4P06798 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Hoxa4P06798 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa4P06798 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.9□□□□□ -0.18
Hoxa4P06798 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.9□□□□□ -0.18
Hoxa4P06798 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa4P06798 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa4P06798 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa4P06798 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa4P06798 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Hoxa4P06798 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa4P06798 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa4P06798 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 Gm9522-201ENSMUST00000182394 926 ntBASIC13.89□□□□□ -0.19
Hoxa4P06798 Gm27437-201ENSMUST00000183429 107 ntBASIC13.89□□□□□ -0.19
Hoxa4P06798 Gm29741-201ENSMUST00000192667 421 ntBASIC13.89□□□□□ -0.19
Hoxa4P06798 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.89□□□□□ -0.19
Hoxa4P06798 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hoxa4P06798 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa4P06798 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms