Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.32■□□□□ 0.04
Tp53P02340 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Tp53P02340 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tp53P02340 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tp53P02340 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tp53P02340 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tp53P02340 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.32■□□□□ 0.04
Tp53P02340 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tp53P02340 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tp53P02340 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tp53P02340 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tp53P02340 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Tp53P02340 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.31■□□□□ 0.04
Tp53P02340 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.31■□□□□ 0.04
Tp53P02340 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tp53P02340 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tp53P02340 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Tp53P02340 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.3■□□□□ 0.04
Tp53P02340 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tp53P02340 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Tp53P02340 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tp53P02340 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tp53P02340 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.29■□□□□ 0.04
Tp53P02340 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tp53P02340 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Tp53P02340 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Tp53P02340 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.29■□□□□ 0.04
Tp53P02340 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.29■□□□□ 0.04
Tp53P02340 Gm15653-201ENSMUST00000119247 907 ntBASIC15.29■□□□□ 0.04
Tp53P02340 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.29■□□□□ 0.04
Tp53P02340 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.29■□□□□ 0.04
Tp53P02340 Gm22175-201ENSMUST00000175007 78 ntBASIC15.29■□□□□ 0.04
Tp53P02340 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.29■□□□□ 0.04
Tp53P02340 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.29■□□□□ 0.04
Tp53P02340 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tp53P02340 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tp53P02340 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tp53P02340 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms