Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Syn1O88935 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Syn1O88935 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Syn1O88935 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Syn1O88935 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.53□□□□□ -0.08
Syn1O88935 Gm13342-201ENSMUST00000121055 207 ntBASIC14.53□□□□□ -0.08
Syn1O88935 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.53□□□□□ -0.08
Syn1O88935 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.53□□□□□ -0.08
Syn1O88935 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.53□□□□□ -0.08
Syn1O88935 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Syn1O88935 Mir7070-201ENSMUST00000183657 86 ntBASIC14.53□□□□□ -0.08
Syn1O88935 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.53□□□□□ -0.08
Syn1O88935 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Gm10012-201ENSMUST00000078252 192 ntBASIC14.53□□□□□ -0.08
Syn1O88935 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Mir433-201ENSMUST00000093564 124 ntBASIC14.53□□□□□ -0.08
Syn1O88935 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Syn1O88935 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Syn1O88935 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Syn1O88935 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syn1O88935 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Syn1O88935 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Syn1O88935 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Syn1O88935 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Syn1O88935 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Syn1O88935 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Syn1O88935 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Syn1O88935 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Syn1O88935 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syn1O88935 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Syn1O88935 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Syn1O88935 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.52□□□□□ -0.09
Syn1O88935 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Olfr286-202ENSMUST00000205305 969 ntBASIC14.52□□□□□ -0.09
Syn1O88935 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.52□□□□□ -0.09
Syn1O88935 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Syn1O88935 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.52□□□□□ -0.09
Syn1O88935 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Syn1O88935 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Syn1O88935 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.51□□□□□ -0.09
Syn1O88935 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syn1O88935 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms